Update Example Build to work with Submodules

Build-Example.py

@@ -8,35 +8,35 @@ import subprocess
 import os
 
 # --------------- CHANGE THESE TWO LINES -------------------------
-OUTPUT_FILE = "Disso.pdf"
+OUTPUT_FILE = "Foo.pdf"
 
 #If you Reame the Header file let me know
 STU_HEADER_FILE = "Dissertation.md" #Students Header File
 
 #ENTER ALL THE SOURCE FILES THAT YOU HAVE IN THE DISSERTAION HERE.
 SOURCE_FILES = ["Example/Intro.md", "Example/Use.md"]
-#SOURCE_FILES = ["markdown_dissertation/Example/Intro.md",
-#                "markdown_dissertation/Example/Use.md"]
+#SOURCE_FILES = ["markdown-dissertation/Example/Intro.md",
+#                "markdown-dissertation/Example/Use.md"]
 
 #Are you using the Submodule Approach
 SUBMODULE = False
 
 #Is it the Default Path
-SUBMODULE_PATH="markdown_dissertation"
+SUBMODULE_PATH="markdown-dissertation"
 # --------------- END OF STUFF THAT YOU NEED TO CHANGE -------------------------
 
 
 def buildCommand():
     """Build the list that we send to pandoc"""
     HEADER_FILE = "Header.md"
-
+    SUB_HEADER_FILE = "SubHeader.md"
     #Needed otherwise refs come on the same page
     FOOTER_FILE = "References.md" 
     # Pandoc Template         
     LATEX_TEMPLATE = "Template/disso.latex"
 
     if SUBMODULE:
-        HEADER_FILE = os.path.join(SUBMODULE_PATH, HEADER_FILE)
+        HEADER_FILE = os.path.join(SUBMODULE_PATH, SUB_HEADER_FILE)
         FOOTER_FILE = os.path.join(SUBMODULE_PATH, FOOTER_FILE)
         LATEX_TEMPLATE = os.path.join(SUBMODULE_PATH, LATEX_TEMPLATE)